Identification of novel inhibitors of extracellular signal-regulated kinase 2 based on the structure-based virtual screening

Bioorg Med Chem Lett. 2008 Oct 15;18(20):5372-6. doi: 10.1016/j.bmcl.2008.09.058. Epub 2008 Sep 18.

Abstract

Extracellular signal-regulated kinase 2 (ERK2) has become an attractive target for the development of therapeutics for the treatment of cancer. We have been able to identify eight new inhibitors of ERK2 by means of a drug design protocol involving the virtual screening with docking simulations and in vitro enzyme assay. The newly discovered inhibitors can be categorized into three structural classes and reveal a significant potency with IC(50) values ranging from 1 to 30 microM. Therefore, all of the three inhibitor scaffolds deserve further development by structure-activity relationship or de novo design methods. Structural features relevant to the stabilizations of the newly identified inhibitors in the ATP-binding site of ERK2 are discussed in detail.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenosine Triphosphate / chemistry
  • Antineoplastic Agents / chemical synthesis
  • Antineoplastic Agents / pharmacology*
  • Binding Sites
  • Chemistry, Pharmaceutical / methods*
  • Drug Design
  • Enzyme Inhibitors / chemical synthesis
  • Enzyme Inhibitors / pharmacology*
  • Humans
  • Inhibitory Concentration 50
  • Mitogen-Activated Protein Kinase 1 / antagonists & inhibitors*
  • Mitogen-Activated Protein Kinase 1 / chemistry
  • Models, Chemical
  • Models, Molecular
  • Models, Statistical
  • Molecular Conformation
  • Neoplasms / drug therapy*
  • p38 Mitogen-Activated Protein Kinases / metabolism

Substances

  • Antineoplastic Agents
  • Enzyme Inhibitors
  • Adenosine Triphosphate
  • Mitogen-Activated Protein Kinase 1
  • p38 Mitogen-Activated Protein Kinases